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A science model context protocol (SMCP)
Published

June 25, 2025

At first, AIs were created to understand the world. Now, a world is created that AIs can understand better.

The Model Context Protocol (MCP) defines a standardised interface between things and AI. Until MCP, LLMs like ChatGPT or Claude had to figure out where to look for data, how to use an application, or how to navigate a website. This often goes wrong, because apps are all different, and data is often not accessible.

Now, if you’d like an AI to easily access your (app, system, data), you can create an MCP server. An MCP consists of a few fundamental building blocks like tools, resources and prompts for whethever task it is you’d like AIs to do. These building blocks are attached to your app and provide exactly the information that an AI needs to use it. Eventually, if everything from browsers to online shopping to booking flights has MCP servers, AIs will be able to easily do all these things for us, because they’ll know how to use them.

Wouldn’t it be cool if science had MCPs? Say, each paper has its own MCP server that cleanly exposes all important parts, such as methods, conclusions, code and data, independent of the layout of the journal or the structure of the code or data repo? Each paper-MCP would also be registered somewhere, so that AIs can just search for it. Let’s call this protocol the Science Model Context Protocol (SMCP).

Here’s a list of things that a high-bandwidth, high-accuracy AI-science interface through SMCPs would enable:

Let’s be clear though, there are risks too:

Whenever we decentralise information, it comes with benefits and risks. In the age of AI, the trajectory is less clear than ever. Should we free science?